CDS

Accession Number TCMCG051C04362
gbkey CDS
Protein Id XP_024467175.1
Location join(34672156..34672226,34672308..34672437,34672527..34672676,34672943..34673117,34673969..34674156,34674256..34674365,34674460..34674562,34675880..34676092,34676184..34676332,34676412..34676553,34676642..34676782,34676998..34677186,34678324..34678540,34680908..34681001,34682829..34683063,34683339..34683530,34685329..34685427,34686736..34686939,34687027..34687329,34689481..34689628,34689733..34689884,34690210..34690365,34690446..34690559,34690676..34690773,34692053..34692077)
Gene LOC7467656
GeneID 7467656
Organism Populus trichocarpa

Protein

Length 1265aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024611407.1
Definition DNA-directed RNA polymerase III subunit 1 isoform X2 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03018        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGCAAAGAGCTCAAGACATAATTTACACGAAGCAGCCTTACATCGAGGATGTCGGTCCACGGAGAATTAAAAGCATTCAATTCTCGACGATGTCTGGATCGGATATTCTGAAAGCCTCTGAATGCCAAGTCCATTTAGGCCAATACTATGACGCAAATAAAAAGGCAATCGTCGGTGGTCTGTTGGATACTCGCATGGGAGCTCCAAATAAACATGGTACCTGTCAAACTTGTGGCGGATCCTTCACAGACTGTCCAGGACACTTTGGATACTTGAACCTTGTCTTGCCAGTTTATAATGTTGGGTATTTAAGTACTATTTTGGACATTCTCAAGTGTATTTGTAAGTCTTGTTCCCGTGTACTTGTCGATGAGAAATTACGCAAAAGTTATTTGAAAAGGATGAGAAATCCTCGGACCGAGCCTCTGAAGAAGAATGAACTTATGAAGGAGATTGTAAAGAAATGCAGTAGCATGGCAAGCAGTAAAGCAGTGAAGTGCTTGAGATGCGGATATATGAATGGTATGGTAAAGAAGGCTGGGTCTGTCGTGGGCATCATTCATGATCGTTCAAAACTGATTGATGGATATTTGGAAGAATGTAAATCTGCAATTGGACACACAAGAGAGGCTAGGGCGCCTATTGGTCTGGCTACTTATATTCTCAACCCTGTCAGAGTGCTGTCTCTTTTTCAAAGGATGGTGGAAGAGGATTGTGAATTGCTTTACTTACAAGGTAGACCTGAGAAGCTCATTATAACAACCATTGCTGTGCCACCTATATCTATCCGACCTTCTGTTTTTACAGAAGGCTCCCAGAGCAATGAAAATGACATTACGGAGCGGTTGAAACAAATTATTCAATTCAATGCGAAACTTCGTCTTGAGTTACTGGAAGGAAGAAGGACTGGGATCAAATATCTGATTGGATGGGATGAACTTCAAGCTGTAGTTACACTATATATAAATAGTGATGTTCGCATACCATTGGATATGCAAGTAGGAAGGCCATTGAGTGGTTTTGTTCAGCGCCTCACAGGAAAGCAAGGTCGATTTCGGCAGAACTTAGCAGGGAAGCGTGTTGAGTTTACTGGAAGGACTGTTATATCACCAGACCCTAATCTTAAGATTACTGAGGTAGCAATTCCGATCCATATGGCTCGGATCTTAACTTATCCTGAACGTGTTACTCATCACAATATTGAGAAGTTGAGGCAATGTGTCAATAATGGATCTTACAAATACCCCGGTGCAAGGATGGTCACATATCCAGATGGCTCATCAAAGATGTTGACAGGTAATTACAGAAAACGCATTGCTGAGGAACTAAAATCTGGTTGCATAGTTCACCGTCATTTGGAAGATGGGGACGTGGTTCTCTTTAACAGACAACCAAGCTTGCATCGGATGTCTATCATGTGCCATAGGGCAAGAATTATGCCTTGGAGAACATTGAGATTTAATGAATCTGTTTGCAACCCTTATAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTCCCGCAAACAGAAGAGGCTCGGACAGAGGCCTTTTTGCTGATGGGGGTTCAAAACAATTTGTGTACACCGAAAAATGGAGAGATCTTGGTGGCCTCAACCCAAGATTTTTTAACATCTTCCTTTCTCATTACAAGGAAGGACACTTTTTATGACCGTGCAGCTTTCTCCCTTATGTGTTCTTACATGAATGATGGCATGGATCTTGTTGATTTGCCAACACCTTCAGTACTTAAGCCAATAGAGCTTTGGACTGGGAAACAATTGTTTAGTGTTCTATTGCGGCCGCATGCTAATGTGAGAGTATATGTAAATCTTATTCTTAAGGAGAAAAACTATTCAAGGCCCAACAAGGAACACAAAAAAGAGCGAGAAACAATGTGTCCTAATGATGGTTATGTTTACTTCCGTAACAGCGAGTTAATTTCTGGACAACTTGGGAAGGCTACTCTAGGTAATGGCAACAAGGATGGTCTCTATTCTATTCTTCTTAGAGACTACAATGCATATGCTGCTGCTACTTGCATGAATCGACTAGCTAAATTGAGTGCTCGCTGGATAGGAAATCATGGCTTCTCAATTGGGATTGATGATGTCCAACCAGGAAAAAAATTGATCGATGAGAAAGGGAAAACAATTTCAAATGGTTATCGACATTGCAATAAACTGATAGCTGATTACAATGGAGGAAGGCTTGCGCTTAAATCTGGTTGTGATGCAACTCAAACACTGGAAACTGAAATAACTGAGAGATTAAATAAGCTTCGAGAGGAAGCTGGGGATGTATGCATGAAAGAATTGCATTGGAGAAACAGTCCATTGATTATGTCACAGTGTGGATCCAAGGGTTCCCCTATCAATATTAGCCAGATGATTGCATGTGTTGGTCAGCAATCAGTTGGAGGTTCCCGTGCTCCTGATGGATTCATAGATCGAAGTCTCCCTCATTTCCCTAGGAAATCCAAGACCCCTGCTGCTAAAGGCTTTGTGGCTAATTCCTTTTATAGTGGTTTGTCGGCAACTGAGTTTTTCTTCCATACCATGGGTGGGAGAGAAGGTCTGGTGGATACTGCGGTGAAAACAGCTGACACTGGATACATGGCTCGTAGACTGAGCAAAGGATTGGAAGACTTGTGTGTTCAATATGATAACACAGTGCAAGATGCAGGTGGAGGTATAGTTCAATTTCTTTATGGAGATGATGGCTTGGATCCTGCTATAATGGAAGGAAAAGCAGGGGTTCCTTTGAATTTTGATAGATTGTTCATGAAAGTTAAGGCAACCTGTGGTGCTGAAGAAGATGAGTACCTTTCCCCTTCAGATATCTCAAACATTGTACAAAGTTTGCTACTAAAGCATAATGGGACTCTTGATGGAATTTGTTCTGAATCCTTCAGAAAAAGTCTTAGTTCTTTCCTTGGGGATCAAGCTAAGAGACTGGAATGCTTGATGAAATTGGTTGATGGTGTTGAGGTAGAGAATTTTGAGAATATAAAAAATGTTGAAGGGCTCACAGGAATTTCTAAGAATACAGAAAAGATTGCTCAGAAGGTCTCTGGTATTACTGAAAAGCAGTTGGAGGTTTTTCTGAAAACCTGCCTTGATCGTTATGTCTGGAAAAGAATTGAACCTGGAACTGCAATTGGAGCAATTGGAGCTCAAAGTATCGGAGAACCAGGAACGCAAATGACATTAAAGACCTTTCACTTTGCTGGAGTTGCGAGCATGAATATAACACAGGGAGTTCCTCGTATTAAAGAAATAATAAATGGTGCCAAAAGGATCAGCACACCTATCATTACAGTAGAACTTGAGCATAATAGTAATGTAAATGCTGCTCGAATCATAAAGGGCCGCATCCAGAAAACTGTTCTAGGCCAGGTCGCGAAAAGTATAAAAATTGTAATGACTTCAAGATCAGCATCAGTAAAGGTTACACTTGACATGAAAACAATTCGTGAGGCACAGTTATCCTTGGATGCTAACATTGTGAGAGAATTGATTTTAGAAACTCCAAAGATTAAGCGGAAGCTGCAGCGTATTAATGTTTTAGAAGATGGAAAGTTGGAAGTTTTTCCAGGTGGTGACAGAAACAAACTTCATTTTGAACTCCATTCTCTTAAAAATATGCTTCCAGCAGTTGTAGTAAAGGGCATAAAAACAGTTGAACGTGTTGTTATTGCCCAGAAGAAGCTTGATGATGCAGAGAATGATCAAGGTGGCCCGAAATACAACATGTTTGTAGAAGGATTGTTAGAAGCTTTCCATTCATAA
Protein:  
MQQRAQDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQFNAKLRLELLEGRRTGIKYLIGWDELQAVVTLYINSDVRIPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGLLEAFHS